I’m not sure if this is a bug or user error, but seemingly every time I install some software, for example the flatpak version of Steam, the Pop! Shop shows an Update available, which then installs the deb version of the same application.
So I end up with two copies of Steam, two copies of VS Code, and a few more apps. Removing this extra deb version works but messes up the app icons.
What is going on?
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Check your repo lists, you may have extra repos that may have been added by your app installs.